Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_02759 | JCGZ_08174 | A0A067L6Q4 | A0A067KPF0 | C2H2-type domain-containing protein. | Uncharacterized protein. | 0.500 |
JCGZ_02759 | JCGZ_11688 | A0A067L6Q4 | A0A067K5C2 | C2H2-type domain-containing protein. | Uncharacterized protein; Belongs to the complex I LYR family. | 0.430 |
JCGZ_02759 | JCGZ_21083 | A0A067L6Q4 | A0A067K1B7 | C2H2-type domain-containing protein. | Nt_Gln_amidase domain-containing protein. | 0.489 |
JCGZ_02759 | JCGZ_22619 | A0A067L6Q4 | A0A067JZW5 | C2H2-type domain-containing protein. | Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. | 0.454 |
JCGZ_08174 | JCGZ_02759 | A0A067KPF0 | A0A067L6Q4 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.500 |
JCGZ_08174 | JCGZ_21083 | A0A067KPF0 | A0A067K1B7 | Uncharacterized protein. | Nt_Gln_amidase domain-containing protein. | 0.584 |
JCGZ_11688 | JCGZ_02759 | A0A067K5C2 | A0A067L6Q4 | Uncharacterized protein; Belongs to the complex I LYR family. | C2H2-type domain-containing protein. | 0.430 |
JCGZ_21083 | JCGZ_02759 | A0A067K1B7 | A0A067L6Q4 | Nt_Gln_amidase domain-containing protein. | C2H2-type domain-containing protein. | 0.489 |
JCGZ_21083 | JCGZ_08174 | A0A067K1B7 | A0A067KPF0 | Nt_Gln_amidase domain-containing protein. | Uncharacterized protein. | 0.584 |
JCGZ_22619 | JCGZ_02759 | A0A067JZW5 | A0A067L6Q4 | Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family. | C2H2-type domain-containing protein. | 0.454 |