STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCGZ_05614Uncharacterized protein. (442 aa)    
Predicted Functional Partners:
JCGZ_21888
Uncharacterized protein.
    
 0.555
JCGZ_20184
Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
    
 0.555
JCGZ_26150
Uncharacterized protein.
    
 0.551
JCGZ_18978
Uncharacterized protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
  0.547
JCGZ_09190
RNA_pol_L_2 domain-containing protein.
    
  0.547
JCGZ_22125
RPOLD domain-containing protein.
    
  0.545
JCGZ_23577
RPOL4c domain-containing protein.
    
  0.540
JCGZ_08747
Spt4 domain-containing protein.
    
 0.486
JCGZ_06535
Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.
    
 0.486
JCGZ_20513
Uncharacterized protein.
  
 
 0.454
Your Current Organism:
Jatropha curcas
NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.
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