Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_01058 | JCGZ_10498 | A0A067KSX0 | A0A067KHQ3 | Uncharacterized protein. | Amidohydro-rel domain-containing protein. | 0.481 |
JCGZ_01058 | JCGZ_12036 | A0A067KSX0 | A0A067KLT8 | Uncharacterized protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.570 |
JCGZ_01058 | JCGZ_17425 | A0A067KSX0 | A0A067LF28 | Uncharacterized protein. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.916 |
JCGZ_01058 | JCGZ_21425 | A0A067KSX0 | A0A067JN55 | Uncharacterized protein. | Amidohydro-rel domain-containing protein. | 0.815 |
JCGZ_01058 | JCGZ_22728 | A0A067KSX0 | A0A067L3Y7 | Uncharacterized protein. | Amidohydro-rel domain-containing protein. | 0.815 |
JCGZ_01058 | JCGZ_24517 | A0A067KSX0 | A0A067KZU4 | Uncharacterized protein. | OMPdecase domain-containing protein. | 0.851 |
JCGZ_02650 | JCGZ_10498 | A0A067L555 | A0A067KHQ3 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | Amidohydro-rel domain-containing protein. | 0.481 |
JCGZ_02650 | JCGZ_12036 | A0A067L555 | A0A067KLT8 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.570 |
JCGZ_02650 | JCGZ_13301 | A0A067L555 | A0A067K810 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.905 |
JCGZ_02650 | JCGZ_17425 | A0A067L555 | A0A067LF28 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.916 |
JCGZ_02650 | JCGZ_21425 | A0A067L555 | A0A067JN55 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | Amidohydro-rel domain-containing protein. | 0.815 |
JCGZ_02650 | JCGZ_22728 | A0A067L555 | A0A067L3Y7 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | Amidohydro-rel domain-containing protein. | 0.815 |
JCGZ_02650 | JCGZ_23855 | A0A067L555 | A0A067L6P9 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.901 |
JCGZ_02650 | JCGZ_24517 | A0A067L555 | A0A067KZU4 | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | OMPdecase domain-containing protein. | 0.851 |
JCGZ_09278 | JCGZ_10498 | A0A067KRS5 | A0A067KHQ3 | FAD-binding FR-type domain-containing protein. | Amidohydro-rel domain-containing protein. | 0.481 |
JCGZ_09278 | JCGZ_12036 | A0A067KRS5 | A0A067KLT8 | FAD-binding FR-type domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.567 |
JCGZ_09278 | JCGZ_17425 | A0A067KRS5 | A0A067LF28 | FAD-binding FR-type domain-containing protein. | Dihydroorotate dehydrogenase (quinone), mitochondrial; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.916 |
JCGZ_09278 | JCGZ_21425 | A0A067KRS5 | A0A067JN55 | FAD-binding FR-type domain-containing protein. | Amidohydro-rel domain-containing protein. | 0.815 |
JCGZ_09278 | JCGZ_22728 | A0A067KRS5 | A0A067L3Y7 | FAD-binding FR-type domain-containing protein. | Amidohydro-rel domain-containing protein. | 0.815 |
JCGZ_09278 | JCGZ_24517 | A0A067KRS5 | A0A067KZU4 | FAD-binding FR-type domain-containing protein. | OMPdecase domain-containing protein. | 0.851 |
page 1 of 5