STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JCGZ_10228RRM domain-containing protein. (395 aa)    
Predicted Functional Partners:
JCGZ_20662
Uncharacterized protein.
   
 
 0.994
JCGZ_03798
Uncharacterized protein.
   
 
 0.981
JCGZ_00876
RNA helicase.
   
 
 0.979
JCGZ_22606
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.976
JCGZ_00843
NUC153 domain-containing protein.
   
 
 0.975
JCGZ_20196
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 
 0.973
JCGZ_21200
Uncharacterized protein.
   
 
 0.970
JCGZ_09682
Uncharacterized protein.
   
 
 0.969
JCGZ_10392
Uncharacterized protein.
   
 
 0.959
JCGZ_03760
Uncharacterized protein.
   
 
 0.959
Your Current Organism:
Jatropha curcas
NCBI taxonomy Id: 180498
Other names: J. curcas, Jatropha curcas L.
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.