Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
JCGZ_04758 | JCGZ_07726 | A0A067L0V0 | A0A067KPE9 | Uncharacterized protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.995 |
JCGZ_04758 | JCGZ_13466 | A0A067L0V0 | A0A067LMI2 | Uncharacterized protein. | DUF5311 domain-containing protein. | 0.992 |
JCGZ_04758 | JCGZ_16897 | A0A067L0V0 | A0A067LGB8 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.443 |
JCGZ_04758 | JCGZ_20337 | A0A067L0V0 | A0A067JMH5 | Uncharacterized protein. | Peptidase S59 domain-containing protein. | 0.937 |
JCGZ_04758 | JCGZ_20869 | A0A067L0V0 | A0A067LI06 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.985 |
JCGZ_04758 | JCGZ_24669 | A0A067L0V0 | A0A067L851 | Uncharacterized protein. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.992 |
JCGZ_04758 | JCGZ_27006 | A0A067L0V0 | A0A067L413 | Uncharacterized protein. | Nuclear pore protein. | 0.995 |
JCGZ_04758 | JCGZ_27015 | A0A067L0V0 | A0A067L0P2 | Uncharacterized protein. | Peptidase S59 domain-containing protein. | 0.937 |
JCGZ_07726 | JCGZ_04758 | A0A067KPE9 | A0A067L0V0 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Uncharacterized protein. | 0.995 |
JCGZ_07726 | JCGZ_13466 | A0A067KPE9 | A0A067LMI2 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | DUF5311 domain-containing protein. | 0.995 |
JCGZ_07726 | JCGZ_16897 | A0A067KPE9 | A0A067LGB8 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | WD_REPEATS_REGION domain-containing protein. | 0.582 |
JCGZ_07726 | JCGZ_20337 | A0A067KPE9 | A0A067JMH5 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Peptidase S59 domain-containing protein. | 0.950 |
JCGZ_07726 | JCGZ_20869 | A0A067KPE9 | A0A067LI06 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.987 |
JCGZ_07726 | JCGZ_24669 | A0A067KPE9 | A0A067L851 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.997 |
JCGZ_07726 | JCGZ_27006 | A0A067KPE9 | A0A067L413 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore protein. | 0.994 |
JCGZ_07726 | JCGZ_27015 | A0A067KPE9 | A0A067L0P2 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Peptidase S59 domain-containing protein. | 0.957 |
JCGZ_13466 | JCGZ_04758 | A0A067LMI2 | A0A067L0V0 | DUF5311 domain-containing protein. | Uncharacterized protein. | 0.992 |
JCGZ_13466 | JCGZ_07726 | A0A067LMI2 | A0A067KPE9 | DUF5311 domain-containing protein. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.995 |
JCGZ_13466 | JCGZ_20337 | A0A067LMI2 | A0A067JMH5 | DUF5311 domain-containing protein. | Peptidase S59 domain-containing protein. | 0.935 |
JCGZ_13466 | JCGZ_20869 | A0A067LMI2 | A0A067LI06 | DUF5311 domain-containing protein. | WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. | 0.987 |
page 1 of 4