STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP10046.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)    
Predicted Functional Partners:
OIP10045.1
Potassium transporter Kef; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.818
OIP11053.1
Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.684
OIP09081.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.556
OIP10044.1
HIT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.496
OIP10042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.488
OIP10043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.488
OIP09615.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.455
OIP10047.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.428
OIP08850.1
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.416
Your Current Organism:
Betaproteobacteria bacterium CG2306842
NCBI taxonomy Id: 1805051
Other names: B. bacterium CG2_30_68_42, Betaproteobacteria bacterium CG2_30_68_42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.