STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIN94464.1Adenylosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)    
Predicted Functional Partners:
OIN92507.1
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.991
OIN94288.1
IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
OIN91923.1
GMP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.974
AUJ20_05770
Aspartate aminotransferase family protein; Metagenomic; derived from metagenome: groundwater metagenome.
  
 0.969
OIN92160.1
Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.928
OIN93308.1
Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.903
OIN93704.1
Asparagine synthase (glutamine-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.901
OIN94465.1
Nicotinate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.895
OIN94301.1
L-aspartate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.883
AUJ20_05190
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.880
Your Current Organism:
Comamonadaceae bacterium CG1026018
NCBI taxonomy Id: 1805088
Other names: C. bacterium CG1_02_60_18, Comamonadaceae bacterium CG1_02_60_18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.