STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLD00976.1Glycine C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)    
Predicted Functional Partners:
OLD00977.1
L-threonine 3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.943
AUJ07_03510
Sulfurtransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.885
OLD04881.1
Aspartate aminotransferase family protein; Catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
   
 0.816
OLD03693.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.812
gcvPB
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.
  
 
 0.809
OLD04177.1
Glycine dehydrogenase (aminomethyl-transferring); Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.794
OLD05847.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.787
OLD02581.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.786
OLD05596.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.782
gcvT
Hypothetical protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.782
Your Current Organism:
Crenarchaeota archaeon 13140CM3535
NCBI taxonomy Id: 1805098
Other names: C. archaeon 13_1_40CM_3_53_5, Crenarchaeota archaeon 13_1_40CM_3_53_5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.