STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIO12474.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (411 aa)    
Predicted Functional Partners:
OIO12481.1
Trehalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.849
OIO10033.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.522
AUJ53_08300
Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
  
    0.468
OIO12475.1
[acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
OIO12476.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
OIO12477.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.448
Your Current Organism:
Flavobacteriaceae bacterium CG1023572
NCBI taxonomy Id: 1805158
Other names: F. bacterium CG1_02_35_72, Flavobacteriaceae bacterium CG1_02_35_72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.