STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIO76974.1Elongation factor 4; Derived by automated computational analysis using gene prediction method: Protein Homology. (625 aa)    
Predicted Functional Partners:
OIO76189.1
30S ribosomal protein S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.969
OIO75869.1
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.968
OIO78192.1
30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.967
OIO76693.1
50S ribosomal protein L1; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.967
OIO76658.1
50S ribosomal protein L11; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.967
OIO75872.1
30S ribosomal protein S7; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.967
OIO77894.1
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.966
OIO77895.1
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 
 0.966
OIO75866.1
30S ribosomal protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.966
OIO75870.1
30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.966
Your Current Organism:
Gracilibacteria bacterium CG10238174
NCBI taxonomy Id: 1805210
Other names: C. Gracilibacteria bacterium CG1_02_38_174, Candidatus Gracilibacteria bacterium CG1_02_38_174
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.