STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIO16251.14Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (131 aa)    
Predicted Functional Partners:
OIO14724.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 0.913
OIO16330.1
Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.871
OIO17055.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.828
OIO16869.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.819
OIO15002.1
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.814
OIO14300.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.801
OIO17205.1
Biotin attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.783
AUJ81_07645
Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
    
 0.780
OIO16250.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OIO16252.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
Your Current Organism:
Helicobacteraceae bacterium CG1023614
NCBI taxonomy Id: 1805214
Other names: H. bacterium CG1_02_36_14, Helicobacteraceae bacterium CG1_02_36_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.