STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIO15762.1General secretion pathway protein GspE; Derived by automated computational analysis using gene prediction method: Protein Homology. (578 aa)    
Predicted Functional Partners:
OIO15761.1
Type II secretion system protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.992
OIO13323.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
OIO15766.1
Pilus (MSHA type) biogenesis protein MshL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.937
OIO15769.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.921
OIO13286.1
Prepilin peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.876
OIO13321.1
Type II secretion system protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.837
OIO15764.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.795
OIO15763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
OIO15765.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
OIO15767.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.787
Your Current Organism:
Helicobacteraceae bacterium CG1023614
NCBI taxonomy Id: 1805214
Other names: H. bacterium CG1_02_36_14, Helicobacteraceae bacterium CG1_02_36_14
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.