STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AUJ54_02515Hypothetical protein; Too many ambiguous residues; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (226 aa)    
Predicted Functional Partners:
OIO18740.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.992
OIO13685.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.978
AUJ54_03120
Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
 
 
 0.956
OIO13735.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.955
OIO23177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.952
OIO15774.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.952
OIO17708.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.951
AUJ54_09670
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.951
OIO21018.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.948
OIO23240.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.946
Your Current Organism:
Ignavibacteria bacterium CG1023735
NCBI taxonomy Id: 1805220
Other names: I. bacterium CG1_02_37_35, Ignavibacteria bacterium CG1_02_37_35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.