STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP59213.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (308 aa)    
Predicted Functional Partners:
OIP60706.1
Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
   0.455
OIP61032.1
23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.452
OIP60520.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.423
OIP59266.1
16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.418
OIP61550.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.414
Your Current Organism:
Nitrospirae bacterium CG2304142
NCBI taxonomy Id: 1805277
Other names: N. bacterium CG2_30_41_42, Nitrospirae bacterium CG2_30_41_42
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.