OIP74925.1 protein (Oscillatoriales cyanobacterium CG2304421)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

OIP74925.1

Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (546 aa)

Predicted Functional Partners:

OIP69119.1

0.942

OIP72536.1

0.936

OIP72537.1

0.922

OIP69118.1

0.917

OIP76767.1

0.797

OIP79046.1

0.777

OIP77372.1

0.737

OIP76768.1

0.722

OIP75279.1

0.721

OIP78599.1

0.710

Your Current Organism:

Oscillatoriales cyanobacterium CG2304421

NCBI taxonomy Id: 1805292
Other names: O. cyanobacterium CG2_30_44_21, Oscillatoriales cyanobacterium CG2_30_44_21

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OIP69118.1	OIP69119.1	AUK48_15070	AUK48_15075	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
OIP69118.1	OIP72536.1	AUK48_15070	AUK48_11215	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
OIP69118.1	OIP74925.1	AUK48_15070	AUK48_08855	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.917
OIP69118.1	OIP76767.1	AUK48_15070	AUK48_05255	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.752
OIP69118.1	OIP76768.1	AUK48_15070	AUK48_05260	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate reductase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.	0.610
OIP69118.1	OIP79046.1	AUK48_15070	AUK48_00410	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.885
OIP69119.1	OIP69118.1	AUK48_15075	AUK48_15070	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.987
OIP69119.1	OIP72536.1	AUK48_15075	AUK48_11215	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
OIP69119.1	OIP72537.1	AUK48_15075	AUK48_11220	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.949
OIP69119.1	OIP74925.1	AUK48_15075	AUK48_08855	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
OIP69119.1	OIP76767.1	AUK48_15075	AUK48_05255	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OIP69119.1	OIP76768.1	AUK48_15075	AUK48_05260	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate reductase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.	0.738
OIP69119.1	OIP79046.1	AUK48_15075	AUK48_00410	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.556
OIP72536.1	OIP69118.1	AUK48_11215	AUK48_15070	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sulfate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.942
OIP72536.1	OIP69119.1	AUK48_11215	AUK48_15075	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.579
OIP72536.1	OIP72537.1	AUK48_11215	AUK48_11220	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
OIP72536.1	OIP74925.1	AUK48_11215	AUK48_08855	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.936
OIP72536.1	OIP76767.1	AUK48_11215	AUK48_05255	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
OIP72536.1	OIP76768.1	AUK48_11215	AUK48_05260	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Nitrate reductase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.	0.762
OIP72536.1	OIP79046.1	AUK48_11215	AUK48_00410	Nitrate ABC transporter, permease protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.741

page 1 of 4

Server load: low (18%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Cooccurrence

Textmining

Coexpression

© STRING Consortium 2023

Credits

Access

Info

About