STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vapCHypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (152 aa)    
Predicted Functional Partners:
AUJ55_05265
DNA (cytosine-5-)-methyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
OIO58302.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OIO58754.1
CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.629
OIO58303.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.556
OIO58304.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.498
OIO58305.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.436
Your Current Organism:
Proteobacteria bacterium CG10264396
NCBI taxonomy Id: 1805333
Other names: P. bacterium CG1_02_64_396, Proteobacteria bacterium CG1_02_64_396
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.