STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIO55875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (468 aa)    
Predicted Functional Partners:
OIO58533.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.998
OIO59167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.991
AUJ55_09430
Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome.
 0.980
OIO58606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.977
OIO59159.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
0.882
OIO60518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.856
OIO59488.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.853
OIO57562.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.850
OIO61211.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.843
OIO60115.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.833
Your Current Organism:
Proteobacteria bacterium CG10264396
NCBI taxonomy Id: 1805333
Other names: P. bacterium CG1_02_64_396, Proteobacteria bacterium CG1_02_64_396
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.