STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP92088.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (202 aa)    
Predicted Functional Partners:
OIP87410.1
Fumarate hydratase; Catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.945
OIP92096.1
Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphatidylserine decarboxylase family.
       0.800
OIP92089.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.781
OIP92043.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.759
OIP89441.1
Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.759
OIP91061.1
Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.745
OIP93220.1
Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.738
OIP92226.1
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.738
sucC
succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
    
 0.733
Your Current Organism:
Syntrophaceae bacterium CG2304912
NCBI taxonomy Id: 1805377
Other names: S. bacterium CG2_30_49_12, Syntrophaceae bacterium CG2_30_49_12
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