STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP89697.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (164 aa)    
Predicted Functional Partners:
OIP89699.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.979
OIP92890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.966
OIP92891.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.959
AUK24_06820
Hypothetical protein; Metagenomic; derived from metagenome: groundwater metagenome; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.959
OIP93397.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.914
OIP89698.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
      0.902
OIP93100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.814
OIP88295.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.814
lolD
ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
 0.813
OIP87058.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.813
Your Current Organism:
Syntrophaceae bacterium CG2304912
NCBI taxonomy Id: 1805377
Other names: S. bacterium CG2_30_49_12, Syntrophaceae bacterium CG2_30_49_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.