STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP88783.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (660 aa)    
Predicted Functional Partners:
OIP93317.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.956
OIP90467.1
(4Fe-4S)-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.956
OIP89956.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.956
OIP88784.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.790
OIP91665.1
Tungsten ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.784
OIP90455.1
Tungstate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.768
OIP89578.1
Involved in autoinducer 2 transport and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.715
OIP92546.1
Phosphoglycerate mutase; Catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate; this enzyme does not require the cofactor 2,3-bisphosphoglycerate as a phosphate donor; BPG-independent PGAM; aPGAM; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.665
OIP90967.1
Cofactor-independent phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.665
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
  0.647
Your Current Organism:
Syntrophaceae bacterium CG2304912
NCBI taxonomy Id: 1805377
Other names: S. bacterium CG2_30_49_12, Syntrophaceae bacterium CG2_30_49_12
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