STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP88475.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (421 aa)    
Predicted Functional Partners:
OIP88474.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.754
OIP90170.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.599
OIP88367.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.594
OIP91547.1
Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.593
OIP92233.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.587
OIP87994.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.576
OIP87995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.576
OIP93205.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.531
OIP91795.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.531
OIP92234.1
Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
    
 0.516
Your Current Organism:
Syntrophaceae bacterium CG2304912
NCBI taxonomy Id: 1805377
Other names: S. bacterium CG2_30_49_12, Syntrophaceae bacterium CG2_30_49_12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.