STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIP96078.1Pseudaminic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (353 aa)    
Predicted Functional Partners:
OIP96080.1
UDP-2,4-diacetamido-2,4, 6-trideoxy-beta-L-altropyranose hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
 0.988
OIP96082.1
Pseudaminic acid cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.988
OIP96084.1
UDP-N-acetylglucosamine 4,6-dehydratase (inverting); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.919
OIP96083.1
UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.912
OIP96074.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.855
OIP95545.1
Phenylphosphate carboxylase subunit delta; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.
  
 0.847
OIP96079.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.793
OIP96076.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.789
OIP96077.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.773
OIP96075.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.769
Your Current Organism:
Thiomicrospira sp. CG2304434
NCBI taxonomy Id: 1805397
Other names: T. sp. CG2_30_44_34, Thiomicrospira sp. CG2_30_44_34
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