STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900086595_01671Unannotated protein. (212 aa)    
Predicted Functional Partners:
GCA_900086595_02058
Unannotated protein.
 
  
 0.916
GCA_900086595_01672
Unannotated protein.
    
 0.892
GCA_900086595_01679
Unannotated protein.
  
    0.843
GCA_900086595_01675
Unannotated protein.
  
    0.820
GCA_900086595_01668
Unannotated protein.
 
     0.806
GCA_900086595_01673
Unannotated protein.
 
     0.715
GCA_900086595_01813
Unannotated protein.
  
 0.693
GCA_900086595_01678
Unannotated protein.
  
    0.680
GCA_900086595_00046
Unannotated protein.
   
 0.674
GCA_900086595_01743
Unannotated protein.
   
 0.671
Your Current Organism:
Clostridium nigeriense
NCBI taxonomy Id: 1805470
Other names: C. nigeriense, CSUR P2414, Clostridium sp. Marseille-P2414, DSM 102218, strain Marseille-P2414
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.