STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155545_03077Unannotated protein. (71 aa)    
Predicted Functional Partners:
GCA_900155545_03076
Unannotated protein.
 
   
 0.932
GCA_900155545_03075
Unannotated protein.
 
  
 0.925
GCA_900155545_00526
Unannotated protein.
 
  
 0.707
GCA_900155545_03078
Unannotated protein.
 
     0.675
GCA_900155545_00487
Unannotated protein.
  
  
 0.597
GCA_900155545_03269
Unannotated protein.
 
  
 0.585
GCA_900155545_03073
Unannotated protein.
 
   
 0.509
GCA_900155545_00532
Unannotated protein.
  
  
 0.493
GCA_900155545_00537
Unannotated protein.
  
  
 0.493
GCA_900155545_02849
Unannotated protein.
 
    0.476
Your Current Organism:
Clostridium sp. MarseilleP2415
NCBI taxonomy Id: 1805471
Other names: C. sp. Marseille-P2415, Clostridium sp. Marseille-P2415
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.