STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155545_03288Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_900155545_00042
Unannotated protein.
  
 0.927
GCA_900155545_01360
Unannotated protein.
  
 0.874
GCA_900155545_00742
Unannotated protein.
 
  
 0.850
GCA_900155545_01840
Unannotated protein.
   
  0.843
GCA_900155545_00761
Unannotated protein.
  
 0.822
GCA_900155545_00741
Unannotated protein.
  
  
 0.810
GCA_900155545_03290
Unannotated protein.
 
     0.808
GCA_900155545_03289
Unannotated protein.
       0.783
GCA_900155545_00283
Unannotated protein.
   
 0.778
GCA_900155545_03287
Unannotated protein.
 
     0.760
Your Current Organism:
Clostridium sp. MarseilleP2415
NCBI taxonomy Id: 1805471
Other names: C. sp. Marseille-P2415, Clostridium sp. Marseille-P2415
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.