STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900119915_00656Unannotated protein. (234 aa)    
Predicted Functional Partners:
GCA_900119915_00657
Unannotated protein.
 
    0.980
GCA_900119915_00658
Unannotated protein.
 
     0.919
GCA_900119915_00655
Unannotated protein.
       0.773
GCA_900119915_01526
Unannotated protein.
    
   0.544
GCA_900119915_01943
Unannotated protein.
    
 
 0.484
GCA_900119915_01979
Unannotated protein.
    
 
 0.484
GCA_900119915_00654
Unannotated protein.
       0.414
Your Current Organism:
Olsenella timonensis
NCBI taxonomy Id: 1805478
Other names: CSUR P2300, DSM 102072, O. timonensis, Olsenella sp. Marseille-P2300, strain Marseille-P2300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.