STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01276Ubiquitin-conjugating enzyme E2 H; Belongs to the ubiquitin-conjugating enzyme family. (163 aa)    
Predicted Functional Partners:
NEDG_00896
Uncharacterized protein.
   
 0.999
NEDG_01398
Ubiquitin-activating enzyme E1.
    
 0.766
NEDG_01104
Ubiquitin-activating enzyme E1 C.
    
 0.717
NEDG_01811
Ubiquitin-conjugating enzyme E2 D/E; Belongs to the ubiquitin-conjugating enzyme family.
   
0.600
NEDG_00344
Ubiquitin-conjugating enzyme E2 G1; Belongs to the ubiquitin-conjugating enzyme family.
   
0.560
NEDG_01999
Ubiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family.
   
0.557
NEDG_00784
Ubiquitin-conjugating enzyme E2 M.
     
0.540
NEDG_01439
Ubiquitin-like 1-activating enzyme E1 B.
    
 0.540
NEDG_00299
Adenylyltransferase and sulfurtransferase.
    
 0.540
NEDG_01363
Ubiquitin-conjugating enzyme E2 D/E.
   
0.534
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.