STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01380DnaJ-like subfamily C member 19. (75 aa)    
Predicted Functional Partners:
NEDG_00236
Molecular chaperone DnaK; Belongs to the heat shock protein 70 family.
    
 0.791
NEDG_01523
Mitochondrial-processing peptidase subunit beta.
    
 0.574
NEDG_00208
J domain-containing protein.
   
 
 0.519
NEDG_01473
Heat shock 7kDa protein 1/8; Belongs to the heat shock protein 70 family.
    
 0.496
NEDG_00552
Heat shock 7kDa protein 1/8.
    
 0.496
NEDG_01829
Heat shock 7kDa protein 4.
    
 0.496
NEDG_01274
FCP1 homology domain-containing protein.
    
 0.468
NEDG_00684
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
    
 0.468
NEDG_00025
CTD nuclear envelope phosphatase 1.
    
 0.468
NEDG_00200
Nitrogen fixation protein NifU; Belongs to the NifU family.
   
 
 0.430
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.