STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_00868Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (207 aa)    
Predicted Functional Partners:
NEDG_00042
Glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.910
NEDG_00630
Peroxiredoxin (Alkyl hydroperoxide reductase subunit C).
  
 
 0.897
NEDG_00343
Small subunit ribosomal protein S11e.
  
 
 0.865
NEDG_01171
Uncharacterized protein.
   
 
 0.843
NEDG_00665
Large subunit ribosomal protein L13Ae.
  
 
 0.834
NEDG_01655
Large subunit ribosomal protein L27Ae; Belongs to the universal ribosomal protein uL15 family.
  
 
 0.793
NEDG_00833
Large subunit ribosomal protein L3e.
  
 
 0.792
NEDG_01855
Small subunit ribosomal protein S13e; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.775
NEDG_01259
Triosephosphate isomerase.
  
 
 0.719
NEDG_02200
Large subunit ribosomal protein L23e; Belongs to the universal ribosomal protein uL14 family.
  
 
 0.718
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.