STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01335Large subunit ribosomal protein LP1. (99 aa)    
Predicted Functional Partners:
NEDG_00030
Large subunit ribosomal protein LP.
  
 0.999
NEDG_00062
Large subunit ribosomal protein LP2.
   
 0.999
NEDG_00639
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.995
NEDG_00584
Large subunit ribosomal protein L19e.
   
 0.994
NEDG_00634
Large subunit ribosomal protein L3e.
   
 0.994
NEDG_00605
Large subunit ribosomal protein L5e.
   
 0.994
NEDG_00702
Small subunit ribosomal protein S3e.
   
 
 0.994
NEDG_00503
Large subunit ribosomal protein L7Ae.
   
 0.994
NEDG_00567
Large subunit ribosomal protein L1Ae.
  
 0.993
NEDG_00678
Large subunit ribosomal protein L6e.
   
 0.993
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.