STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01443Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
NEDG_01353
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.999
NEDG_01875
DNA replication licensing factor MCM5; Belongs to the MCM family.
   
 0.965
NEDG_02154
DNA replication licensing factor MCM3; Belongs to the MCM family.
   
 0.957
NEDG_00168
DNA polymerase.
   
 0.957
NEDG_00761
DNA helicase; Belongs to the MCM family.
   
 0.952
NEDG_00315
DNA polymerase.
   
 0.931
NEDG_00557
GINS complex subunit 2.
   
 
 0.924
NEDG_00326
Uncharacterized protein.
   
 
 0.912
NEDG_01088
DNA primase large subunit.
   
 0.907
NEDG_02157
DNA polymerase alpha subunit B.
   
 
 0.884
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.