STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_00572mRNA-decapping enzyme subunit 2. (241 aa)    
Predicted Functional Partners:
NEDG_01004
Uncharacterized protein.
    
 0.999
NEDG_00788
5'-3' exoribonuclease 1.
   
 0.999
NEDG_01668
ATP-dependent RNA helicase DDX6/DHH1.
   
 0.999
NEDG_00431
U6 snRNA-associated Sm-like protein LSm1.
    
 0.867
LSM4
U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.
    
 0.850
NEDG_01093
HIT domain-containing protein.
  
 0.846
NEDG_00248
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.837
NEDG_00484
Inosine triphosphate pyrophosphatase.
  
 
 0.827
NEDG_01706
Adenylate kinase; Belongs to the adenylate kinase family.
  
 0.805
NEDG_00715
LSM14 domain-containing protein.
    
 
 0.805
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.