STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_02195Cytoplasmic tRNA 2-thiolation protein 1. (309 aa)    
Predicted Functional Partners:
NEDG_00957
Phosphoacetylglucosamine mutase.
   
 0.892
NEDG_00176
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
  0.871
NEDG_00484
Inosine triphosphate pyrophosphatase.
    
  0.865
NEDG_00597
Guanylate kinase.
     
 0.861
NEDG_00265
Adrenodoxin-NADP+ reductase.
    
  0.861
NEDG_00279
AMP deaminase.
  
 
 0.859
NEDG_01951
Glucosamine--fructose-6-phosphate aminotransferase (Isomerizing).
    
  0.858
NEDG_01493
Uncharacterized protein.
  
 
 0.854
NEDG_01091
Exosome complex component RRP41.
  
 
  0.847
NEDG_01064
tRNA-specific adenosine deaminase 2.
  
 
 0.845
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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