STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01648Translation initiation factor 3 subunit I. (347 aa)    
Predicted Functional Partners:
NEDG_00187
Translation initiation factor 2 subunit 1.
   
 0.990
NEDG_00887
Translation initiation factor 5.
   
 0.985
NEDG_00214
Translation initiation factor 2 subunit 3.
   
 0.979
NEDG_01090
Translation initiation factor 1.
   
 0.975
NEDG_00839
Translation initiation factor 2 subunit 2.
   
 0.975
NEDG_00702
Small subunit ribosomal protein S3e.
   
 0.962
NEDG_00238
Small subunit ribosomal protein S2e.
   
 0.957
NEDG_02047
Small subunit ribosomal protein S2e; Belongs to the universal ribosomal protein uS5 family.
   
 0.951
NEDG_01870
Guanine nucleotide-binding protein subunit beta-2-like 1 protein.
  
 
 0.950
NEDG_00621
Translation initiation factor 1A.
   
 0.947
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.