STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01962Uncharacterized protein. (173 aa)    
Predicted Functional Partners:
NEDG_01277
Dihydrofolate reductase.
     
 0.935
NEDG_01694
Thymidylate synthase.
     
 0.935
NEDG_00930
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.912
NEDG_01896
Glycos_transf_1 domain-containing protein.
   
 
 0.867
NEDG_01706
Adenylate kinase; Belongs to the adenylate kinase family.
    
 0.720
NEDG_00203
Bifunctional glutamyl/prolyl-tRNA synthetase.
  
  
 0.700
NEDG_01638
TPR_REGION domain-containing protein.
     
 0.692
NEDG_00258
Anaphase-promoting complex subunit 3.
     
 0.692
NEDG_00619
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.678
NEDG_01098
Uncharacterized protein.
    
 0.671
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.