STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_00313Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. (1850 aa)    
Predicted Functional Partners:
NEDG_01966
Ataxia telangiectasia mutated family protein; Belongs to the PI3/PI4-kinase family.
   
0.998
NEDG_01524
Serine/threonine-protein kinase Chk1.
    
 0.982
NEDG_01762
Uncharacterized protein.
   
 0.944
NEDG_02066
DNA excision repair protein ERCC-4.
   
 0.943
NEDG_02201
Cell division control protein 7; Belongs to the protein kinase superfamily.
    
 0.933
NEDG_01241
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.898
NEDG_01299
Uncharacterized protein.
    
 0.891
NEDG_00171
Crossover junction endonuclease MUS81.
   
 0.890
NEDG_00339
Replication factor A1.
    
 0.883
NEDG_00898
Double-strand break repair protein MRE11.
   
 0.849
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.