STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_01642Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family. (436 aa)    
Predicted Functional Partners:
NEDG_01546
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
0.999
NEDG_00849
Uncharacterized protein.
   
  0.920
NEDG_01442
Actin beta/gamma 1.
   
 0.867
NEDG_02161
Ras-like protein family, member A.
   
 0.866
NEDG_02002
Uncharacterized protein.
   
 0.866
NEDG_01144
Uncharacterized protein.
   
 0.820
NEDG_01543
Calponin-homology (CH) domain-containing protein.
   
 0.810
NEDG_01207
Protein kinase domain-containing protein.
   
 
 0.779
NEDG_00163
ADP-ribosylation factor-like protein 8.
   
 0.774
NEDG_01592
Ras-related protein Rab-11A.
   
 0.774
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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