STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_0017740S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (224 aa)    
Predicted Functional Partners:
NEDG_00924
U3 small nucleolar RNA-associated protein 24.
    
 0.999
NEDG_01124
Large subunit ribosomal protein L23Ae.
   
 
 0.999
NEDG_00985
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.999
NEDG_01222
Small subunit ribosomal protein S27e.
   
 0.999
NEDG_01258
Small subunit ribosomal protein S21e.
   
 0.999
NEDG_01268
Large subunit ribosomal protein L4e.
  
 0.999
NEDG_01278
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.999
NEDG_00929
RNA-binding protein PNO1.
   
  0.999
NEDG_01401
Protein kinase domain-containing protein.
    
  0.999
NEDG_00588
Small subunit ribosomal protein S18e; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.