STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_00174Ran GTPase-activating protein 1. (373 aa)    
Predicted Functional Partners:
NEDG_01165
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.999
NEDG_01219
Ubiquitin-conjugating enzyme E2 I; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.999
NEDG_00896
Uncharacterized protein.
   
 0.999
NEDG_02165
Ran-binding protein 1.
   
 0.991
NEDG_01062
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.926
NEDG_00051
Small ubiquitin-related modifier.
    
 0.859
NEDG_00728
Peptidyl-prolyl isomerase D.
   
 0.838
NEDG_01693
Uncharacterized protein.
   
 
 0.777
NEDG_00287
Exportin-1.
   
 
 0.724
NEDG_00146
Nuclear pore complex protein Nup155.
   
 0.694
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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