STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEDG_00204MSP domain-containing protein. (158 aa)    
Predicted Functional Partners:
NEDG_00884
Phosphatidylinositol 4-kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.569
NEDG_00136
t-SNARE coiled-coil homology domain-containing protein.
    
 0.545
NEDG_00360
Uncharacterized protein.
    
 0.508
NEDG_00539
t-SNARE coiled-coil homology domain-containing protein.
    
 0.482
NEDG_01721
Syntaxin 1B/2/3.
    
 0.482
NEDG_01412
Uncharacterized protein.
    
 0.482
NEDG_00599
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.455
NEDG_00566
SMP-LTD domain-containing protein.
    
 
 0.448
NEDG_01144
Uncharacterized protein.
    
 0.442
NEDG_01681
Glycerol-3-phosphate O-acyltransferase 3/4.
    
 0.436
Your Current Organism:
Nematocida displodere
NCBI taxonomy Id: 1805483
Other names: N. displodere, Nematocida displodere Luallen et al. 2016, Nematocida sp. JUm2807
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.