STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0149Diacylglycerol acyltransferase/mycolyltransferase Ag85C. (340 aa)    
Predicted Functional Partners:
RN08_2092
Diacylglycerol acyltransferase/mycolyltransferase Ag85B.
  
  
0.949
RN08_4199
Terminal beta-(1->2)-arabinofuranosyltransferase.
 
  
  0.912
RN08_3412
Triacylglycerol lipase Lip.
    
 0.903
RN08_4198
Diacylglycerol acyltransferase/mycolyltransferase Ag85A.
  
  
 
0.902
RN08_2501
Diacylglycerol kinase.
     
  0.900
RN08_4196
Membrane protein.
 
   
 0.802
RN08_4193
Polyketide synthase; Overlaps another CDS with the same product name.
 
  
 0.784
RN08_4204
Cell surface protein.
 
  
 0.769
RN08_3806
ESAT-6 like protein EsxT.
  
   
 0.739
RN08_4044
Protease.
 
     0.729
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.