STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_02743-oxoacyl-ACP reductase FabG. (454 aa)    
Predicted Functional Partners:
RN08_0273
3-hydroxyacyl-thioester dehydratase HtdX.
 
 0.994
RN08_0275
acetyl-CoA acetyltransferase FadA.
 
 0.992
RN08_2799
Fatty acid synthase.
  
 0.983
RN08_2491
Malonyl CoA-acyl carrier protein transacylase.
 
 0.956
RN08_3914
Dehydrogenase.
 
 0.932
RN08_0858
Oxidoreductase.
  
  
 
0.914
RN08_3935
Oxidoreductase.
  
  
 
0.913
RN08_1511
3-oxoacyl-ACP reductase FabG.
  
  
 
0.912
RN08_0724
Malonyl CoA-acyl carrier protein transacylase.
     
  0.900
RN08_3739
3-hydroxyacyl-thioester dehydratase HtdY.
 
 0.894
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.