Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Gene Fusion
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Co-expression
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[Homology]
Score
RN08_0281Succinate dehydrogenase membrane anchor subunit. (273 aa)    
Predicted Functional Partners:
RN08_0279
Succinate dehydrogenase iron-sulfur subunit.
 
 
 0.999
RN08_0280
Succinate dehydrogenase flavoprotein subunit.
 
 
 0.997
RN08_3662
Succinate dehydrogenase iron-sulfur protein subunit.
   
 0.909
RN08_0282
Hypothetical protein.
 
   
 0.875
RN08_1741
Fumarate reductase iron-sulfur subunit.
   
 0.843
RN08_3661
Succinate dehydrogenase flavoprotein subunit.
   
 0.809
RN08_3659
Succinate dehydrogenase cytochrome B-556 subunit.
     
 0.768
RN08_1740
Fumarate reductase flavoprotein subunit.
   
 0.720
RN08_2021
Flavoprotein.
   
 0.597
RN08_3913
3-oxosteroid 1-dehydrogenase.
   
 0.597
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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