STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0327PE family protein PE5. (102 aa)    
Predicted Functional Partners:
RN08_0328
PPE family protein PPE4.
     
 0.958
RN08_0329
ESAT-6 like protein EsxG.
     
 0.933
RN08_0325
ESX-3 secretion system protein EccB3.
     
 0.910
RN08_0324
ESX-3 secretion system protein EccA.
       0.874
RN08_0326
ESX-3 secretion system protein EccC3.
     
 0.873
RN08_0330
ESAT-6-like protein EsxH.
     
 0.804
RN08_0331
ESX-3 secretion-associated protein EspG3.
     
 0.632
RN08_2353
PPE family protein PPE37.
     
 0.618
RN08_0332
ESX-3 secretion system protein EccD.
     
 0.601
RN08_0333
Membrane-anchored mycosin MycP.
       0.537
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.