STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0540D-inositol 3-phosphate glycosyltransferase. (477 aa)    
Predicted Functional Partners:
RN08_1314
1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase.
 
 0.956
RN08_0055
Inositol-3-phosphate synthase.
 
 
 0.946
RN08_1213
Mycothiol S-conjugate amidase.
 
 
 0.893
RN08_0915
Mycothiol acetyltransferase.
  
   
 0.892
RN08_0541
Hypothetical protein.
 
     0.891
RN08_0131
Phosphoheptose isomerase.
 
  
 0.875
RN08_2361
cysteine:1D-myo-inosityl 2-amino-2-deoxy--D-glucopyranoside ligase.
  
   
 0.835
RN08_1485
1,4-alpha-glucan branching protein.
  
 0.821
RN08_1751
Malto-oligosyltrehalose trehalohydrolase.
  
 0.819
RN08_0539
Transcriptional regulator.
    
 0.787
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.