STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0568Hypothetical protein. (92 aa)    
Predicted Functional Partners:
RN08_0636
Vitamin B12-dependent ribonucleoside-diphosphate reductase; Overlaps another CDS with the same product name.
  
 0.879
RN08_0637
Vitamin B12-dependent ribonucleoside-diphosphate reductase; Overlaps another CDS with the same product name.
  
 0.879
RN08_3362
Ribonucleoside-diphosphate reductase subunit alpha.
  
 0.879
RN08_0566
Membrane protein MmpS2; Overlaps another CDS with the same product name.
       0.867
RN08_0567
Transmembrane transport protein MmpL2.
       0.848
RN08_0569
glutamyl-tRNA reductase.
     
 0.807
RN08_0570
Porphobilinogen deaminase.
       0.802
RN08_0565
Membrane protein MmpS2; Overlaps another CDS with the same product name.
       0.775
RN08_0564
Phosphoserine phosphatase SerB.
 
     0.711
RN08_0574
Transmembrane protein; Overlaps another CDS with the same product name.
 
     0.667
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.