STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0682Ribonuclease VapC28. (133 aa)    
Predicted Functional Partners:
RN08_0696
Antitoxin VapB30.
 
 
 0.929
RN08_0681
Antitoxin VapB28.
  
 
 0.924
RN08_1934
Antitoxin VapB34.
  
 
 0.704
RN08_0680
Hypothetical protein.
       0.683
RN08_0678
Resolvase.
       0.657
RN08_0679
Transposase.
       0.657
RN08_1250
Ribonuclease VapC32.
  
  
 0.637
RN08_0343
Ribonuclease VapC2.
  
  
 0.628
RN08_0671
Ribonuclease VapC27.
     
 0.617
RN08_2225
Ribonuclease VapC15.
  
  
 0.593
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.