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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0719Cyclopropane mycolic acid synthase MmaA2. (306 aa)    
Predicted Functional Partners:
RN08_0718
Methoxy mycolic acid synthase MmaA3.
 
   
0.616
RN08_1134
50S ribosomal protein L25.
   
    0.613
RN08_0501
Hypothetical protein.
 
 0.574
RN08_0720
Mycolic acid methyltransferase MmaA1.
 
    
0.559
RN08_0721
Lipase/esterase LipG.
  
  
 0.521
RN08_0722
Hypothetical protein.
     
 0.511
RN08_0500
Hypothetical protein.
  
 0.461
RN08_0717
Hydroxymycolate synthase MmaA4.
 
    
0.414
RN08_2494
3-oxoacyl-ACP synthase 2.
     
 0.414
RN08_2408
Lipoprotein LppM.
      
 0.405
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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