STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RN08_0737Ribonuclease VapC7. (145 aa)    
Predicted Functional Partners:
RN08_0738
Antitoxin VapB7.
     
 0.891
RN08_1250
Ribonuclease VapC32.
     
 0.584
RN08_0736
Antitoxin MazE2.
       0.573
RN08_1067
Ribonuclease VapC9.
      
 0.567
RN08_0740
Antitoxin VapB8.
     
 0.545
RN08_0741
Ribonuclease VapC8.
     
 0.544
RN08_0739
Arylsulfatase AtsD.
       0.540
RN08_1564
Antitoxin VapB10.
      
 0.534
RN08_0834
Antitoxin VapB31.
   
 
 0.434
RN08_0735
Toxin MazF2.
       0.429
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.