Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RN08_0773Mycofactocin radical SAM maturase MftC. (391 aa)    
Predicted Functional Partners:
RN08_0772
Mycofactocin system protein MftB.
 
 
 0.998
RN08_0774
Mycofactocin system heme/flavin oxidoreductase MftD.
 
  
 0.996
RN08_0776
Mycofactocin biosynthesis glycosyltransferase MftF.
 
   
 0.970
RN08_0775
Mycofactocin system creatinine amidohydrolase family protein MftE.
 
 
 0.968
RN08_0771
Hypothetical protein.
     
 0.938
RN08_0770
Mycofactocin biosynthesis transcriptional regulator MftR.
 
  
 0.921
RN08_3036
Dehydrogenase.
  
   
 0.691
RN08_2203
Dehydrogenase.
  
   
 0.684
RN08_0777
Dehydrogenase.
     
 0.622
RN08_3435
Molybdopterin synthase catalytic subunit 1.
  
 
 0.621
Your Current Organism:
Mycobacterium tuberculosis variant microti
NCBI taxonomy Id: 1806
Other names: ATCC 19422, CIP 104256, M. tuberculosis variant microti, Mycobacterium microti, Mycobacterium muris, Mycobacterium tuberculosis var. muris, NCTC 8710
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